Elements

Defines an Atom class for each element.

class Ac(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Ac
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Ac
Returns: A clone with a new id.

class Ag(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Ag
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Ag
Returns: A clone with a new id.

class Al(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Al
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Al
Returns: A clone with a new id.

class Am(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Am
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Am
Returns: A clone with a new id.

class Ar(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Ar
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Ar
Returns: A clone with a new id.

class As(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: As
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: As
Returns: A clone with a new id.

class At(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: At
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: At
Returns: A clone with a new id.

class AtomImpl(id, charge=0)[source]

Bases: stk.molecular.atoms.atom.Atom

An implementation of the Atom interface.

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)[source]

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: AtomImpl
Returns: The clone.

get_atomic_number()[source]

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()[source]

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()[source]

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: AtomImpl
Returns: A clone with a new id.

class Au(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Au
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Au
Returns: A clone with a new id.

class B(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: B
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: B
Returns: A clone with a new id.

class Ba(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Ba
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Ba
Returns: A clone with a new id.

class Be(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Be
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Be
Returns: A clone with a new id.

class Bh(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Bh
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Bh
Returns: A clone with a new id.

class Bi(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Bi
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Bi
Returns: A clone with a new id.

class Bk(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Bk
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Bk
Returns: A clone with a new id.

class Br(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Br
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Br
Returns: A clone with a new id.

class C(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: C
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: C
Returns: A clone with a new id.

class Ca(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Ca
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Ca
Returns: A clone with a new id.

class Cd(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Cd
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Cd
Returns: A clone with a new id.

class Ce(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Ce
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Ce
Returns: A clone with a new id.

class Cf(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Cf
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Cf
Returns: A clone with a new id.

class Cl(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Cl
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Cl
Returns: A clone with a new id.

class Cm(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Cm
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Cm
Returns: A clone with a new id.

class Cn(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Cn
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Cn
Returns: A clone with a new id.

class Co(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Co
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Co
Returns: A clone with a new id.

class Cr(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Cr
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Cr
Returns: A clone with a new id.

class Cs(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Cs
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Cs
Returns: A clone with a new id.

class Cu(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Cu
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Cu
Returns: A clone with a new id.

class Db(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Db
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Db
Returns: A clone with a new id.

class Ds(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Ds
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Ds
Returns: A clone with a new id.

class Dy(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Dy
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Dy
Returns: A clone with a new id.

class Er(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Er
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Er
Returns: A clone with a new id.

class Es(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Es
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Es
Returns: A clone with a new id.

class Eu(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Eu
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Eu
Returns: A clone with a new id.

class F(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: F
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: F
Returns: A clone with a new id.

class Fe(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Fe
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Fe
Returns: A clone with a new id.

class Fl(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Fl
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Fl
Returns: A clone with a new id.

class Fm(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Fm
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Fm
Returns: A clone with a new id.

class Fr(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Fr
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Fr
Returns: A clone with a new id.

class Ga(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Ga
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Ga
Returns: A clone with a new id.

class Gd(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Gd
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Gd
Returns: A clone with a new id.

class Ge(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Ge
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Ge
Returns: A clone with a new id.

class H(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: H
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: H
Returns: A clone with a new id.

class He(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: He
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: He
Returns: A clone with a new id.

class Hf(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Hf
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Hf
Returns: A clone with a new id.

class Hg(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Hg
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Hg
Returns: A clone with a new id.

class Ho(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Ho
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Ho
Returns: A clone with a new id.

class Hs(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Hs
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Hs
Returns: A clone with a new id.

class I(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: I
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: I
Returns: A clone with a new id.

class In(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: In
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: In
Returns: A clone with a new id.

class Ir(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Ir
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Ir
Returns: A clone with a new id.

class K(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: K
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: K
Returns: A clone with a new id.

class Kr(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Kr
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Kr
Returns: A clone with a new id.

class La(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: La
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: La
Returns: A clone with a new id.

class Li(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Li
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Li
Returns: A clone with a new id.

class Lr(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Lr
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Lr
Returns: A clone with a new id.

class Lu(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Lu
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Lu
Returns: A clone with a new id.

class Lv(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Lv
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Lv
Returns: A clone with a new id.

class Mc(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Mc
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Mc
Returns: A clone with a new id.

class Md(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Md
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Md
Returns: A clone with a new id.

class Mg(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Mg
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Mg
Returns: A clone with a new id.

class Mn(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Mn
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Mn
Returns: A clone with a new id.

class Mo(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Mo
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Mo
Returns: A clone with a new id.

class Mt(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Mt
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Mt
Returns: A clone with a new id.

class N(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: N
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: N
Returns: A clone with a new id.

class Na(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Na
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Na
Returns: A clone with a new id.

class Nb(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Nb
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Nb
Returns: A clone with a new id.

class Nd(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Nd
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Nd
Returns: A clone with a new id.

class Ne(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Ne
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Ne
Returns: A clone with a new id.

class Nh(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Nh
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Nh
Returns: A clone with a new id.

class Ni(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Ni
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Ni
Returns: A clone with a new id.

class No(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: No
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: No
Returns: A clone with a new id.

class Np(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Np
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Np
Returns: A clone with a new id.

class O(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: O
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: O
Returns: A clone with a new id.

class Og(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Og
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Og
Returns: A clone with a new id.

class Os(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Os
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Os
Returns: A clone with a new id.

class P(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: P
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: P
Returns: A clone with a new id.

class Pa(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Pa
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Pa
Returns: A clone with a new id.

class Pb(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Pb
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Pb
Returns: A clone with a new id.

class Pd(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Pd
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Pd
Returns: A clone with a new id.

class Pm(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Pm
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Pm
Returns: A clone with a new id.

class Po(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Po
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Po
Returns: A clone with a new id.

class Pr(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Pr
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Pr
Returns: A clone with a new id.

class Pt(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Pt
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Pt
Returns: A clone with a new id.

class Pu(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Pu
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Pu
Returns: A clone with a new id.

class Ra(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Ra
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Ra
Returns: A clone with a new id.

class Rb(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Rb
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Rb
Returns: A clone with a new id.

class Re(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Re
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Re
Returns: A clone with a new id.

class Rf(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Rf
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Rf
Returns: A clone with a new id.

class Rg(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Rg
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Rg
Returns: A clone with a new id.

class Rh(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Rh
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Rh
Returns: A clone with a new id.

class Rn(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Rn
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Rn
Returns: A clone with a new id.

class Ru(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Ru
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Ru
Returns: A clone with a new id.

class S(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: S
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: S
Returns: A clone with a new id.

class Sb(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Sb
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Sb
Returns: A clone with a new id.

class Sc(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Sc
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Sc
Returns: A clone with a new id.

class Se(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Se
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Se
Returns: A clone with a new id.

class Sg(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Sg
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Sg
Returns: A clone with a new id.

class Si(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Si
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Si
Returns: A clone with a new id.

class Sm(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Sm
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Sm
Returns: A clone with a new id.

class Sn(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Sn
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Sn
Returns: A clone with a new id.

class Sr(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Sr
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Sr
Returns: A clone with a new id.

class Ta(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Ta
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Ta
Returns: A clone with a new id.

class Tb(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Tb
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Tb
Returns: A clone with a new id.

class Tc(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Tc
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Tc
Returns: A clone with a new id.

class Te(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Te
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Te
Returns: A clone with a new id.

class Th(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Th
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Th
Returns: A clone with a new id.

class Ti(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Ti
Returns: The clone.

get_atomic_number()

Get the atomic number of the atom.

Return type: int
Returns: The atomic number.

get_charge()

Get the charge of the atom.

Return type: int
Returns: The charge.

get_id()

Get the id of the atom.

Return type: int
Returns: The id.

with_id(id)[source]

Get a clone but with a different id.

Parameters: id (int) – The id of the clone.
Return type: Ti
Returns: A clone with a new id.

class Tl(id, charge=0)[source]

Bases: stk.molecular.atoms.elements.AtomImpl

Methods

`clone`()	Return a clone.
`get_atomic_number`()	Get the atomic number of the atom.
`get_charge`()	Get the charge of the atom.
`get_id`()	Get the id of the atom.
`with_id`(id)	Get a clone but with a different id.

__init__(id, charge=0)

Initialize an Atom.

Parameters

id (int) – The id of the atom.
atomic_number – The atomic number.
charge (int) – The formal charge.

clone()[source]

Return a clone.

Return type: Tl
Returns: The clone.